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Thermus thermophilus HB27 (tthe0)
Gene : hemD
DDBJ      :hemD         putative uroporphyrinogen-III synthase hemD
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
c.113.1
:225 amino acids
:PSIPRED
:RPS:SCOP  28->201 1wd7A  c.113.1.1 * 1e-04 25.4 %
:HMM:SCOP  1->224 1jr2A_ c.113.1.1 * 1.1e-37 39.2 %
:RPS:PFM   73->210 PF02602 * HEM4 2e-06 39.1 %
:HMM:PFM   10->217 PF02602 * HEM4 1e-48 39.4 208/229  
:BLT:SWISS 5->146 HEM4_ORYSJ 1e-17 37.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81485.1 GT:GENE hemD GT:PRODUCT putative uroporphyrinogen-III synthase hemD GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(1112295..1112972) GB:FROM 1112295 GB:TO 1112972 GB:DIRECTION - GB:GENE hemD GB:PRODUCT putative uroporphyrinogen-III synthase hemD GB:PROTEIN_ID AAS81485.1 GB:DB_XREF GI:46197071 GB:GENE:GENE hemD LENGTH 225 SQ:AASEQ MLLTRGKDRALLARLAALGIEAAEVALLEQVDLPARALLSEKLKEGWDYVAVTSKEGAKRLLLAWEEAGRPFLRVAAVGEGTAGVLRAGGLPPAFLPPRATAKDLAQSFPQAQRVLFVAGDLAGRDLEEGLRARGVEVVRLPVYATRERALAPEEVALLERAEVVAFFSPSGVRAFARWTAKRPKAAAIGPSTGEEARRLGFPVVEAESPGLEGLFAALLRALGR GT:EXON 1|1-225:0| BL:SWS:NREP 1 BL:SWS:REP 5->146|HEM4_ORYSJ|1e-17|37.3|142/302| SEG 9->18|rallarlaal| SEG 147->166|reralapeevalleraevva| SEG 211->224|gleglfaallralg| RP:PFM:NREP 1 RP:PFM:REP 73->210|PF02602|2e-06|39.1|138/228|HEM4| HM:PFM:NREP 1 HM:PFM:REP 10->217|PF02602|1e-48|39.4|208/229|HEM4| GO:PFM:NREP 2 GO:PFM GO:0004852|"GO:uroporphyrinogen-III synthase activity"|PF02602|IPR003754| GO:PFM GO:0033014|"GO:tetrapyrrole biosynthetic process"|PF02602|IPR003754| RP:SCP:NREP 1 RP:SCP:REP 28->201|1wd7A|1e-04|25.4|173/254|c.113.1.1| HM:SCP:REP 1->224|1jr2A_|1.1e-37|39.2|222/260|c.113.1.1|1/1|HemD-like| OP:NHOMO 21 OP:NHOMOORG 19 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------2-------------------------------------------------------------------11121--111111-1111----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED cccccccHHHHHHHHHHccccEEEEEEEEEEEccccHHHHHHHHccccEEEEEcHHHHHHHHHHHHHccccccEEEEEcHHHHHHHHHcccccEEEcccccHHHHHHHHcccccEEEEEEccccHHHHHHHHHcccEEEEEEEEEcccccccHHHHHHHccccEEEEEcHHHHHHHHHHcccccEEEEEcHHHHHHHHHccccEEEcccccHHHHHHHHHHHHcc //