[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermus thermophilus HB27 (tthe0)
Gene : hrcA
DDBJ      :hrcA         heat-inducible transcription repressor hrcA
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  260/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5d.110.2
:300 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->227 1stzA PDBj 9e-14 34.9 %
:RPS:PDB   1->61 2dbbA PDBj 1e-07 10.7 %
:RPS:SCOP  1->69 1hqcA1  a.4.5.11 * 4e-10 29.2 %
:RPS:SCOP  109->295 1stzA2  d.110.2.3 * 2e-12 22.8 %
:HMM:SCOP  1->84 1stzA1 a.4.5.51 * 3.9e-17 44.0 %
:HMM:SCOP  68->298 1stzA2 d.110.2.3 * 4.5e-20 33.2 %
:RPS:PFM   1->69 PF03444 * DUF293 4e-13 53.6 %
:RPS:PFM   110->232 PF01628 * HrcA 2e-04 35.8 %
:HMM:PFM   109->283 PF01628 * HrcA 7.1e-11 36.0 175/224  
:HMM:PFM   1->53 PF01726 * LexA_DNA_bind 2e-08 44.2 52/65  
:BLT:SWISS 1->291 HRCA_PROMM 5e-17 30.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS82290.1 GT:GENE hrcA GT:PRODUCT heat-inducible transcription repressor hrcA GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(1854935..1855837) GB:FROM 1854935 GB:TO 1855837 GB:DIRECTION - GB:GENE hrcA GB:PRODUCT heat-inducible transcription repressor hrcA GB:PROTEIN_ID AAS82290.1 GB:DB_XREF GI:46197878 GB:GENE:GENE hrcA LENGTH 300 SQ:AASEQ MTARQRRVLHLLVDEYIQTKAPVPSARIAEGLGLSPALARYELIALEEMGYLTKPHASAGRVPTRQGFRQYSLSLLPPRPLPEATRRRLERALEGAREPEAFLVKVAVGLSGYPALLRLQPRRAPKLLQVHLSPLPEGTLAVLVLEGGRVKEVRLPLVLPQEALRRAEEALTGPLETLPAAPKGLEDLFAHLSRALASGFALRYREGLSEALKEPEAKDPGFLERLVALYEEGGEDLLTPPGRVDVRVGEVEGLALVQAGFQKGEWLGELTLIGPLRMRYAEALSVAFSLSQVYTGQHAD GT:EXON 1|1-300:0| BL:SWS:NREP 1 BL:SWS:REP 1->291|HRCA_PROMM|5e-17|30.4|289/352| SEG 72->101|slsllpprplpeatrrrleralegarepea| SEG 242->253|grvdvrvgeveg| BL:PDB:NREP 1 BL:PDB:REP 4->227|1stzA|9e-14|34.9|215/323| RP:PDB:NREP 1 RP:PDB:REP 1->61|2dbbA|1e-07|10.7|56/146| RP:PFM:NREP 2 RP:PFM:REP 1->69|PF03444|4e-13|53.6|69/76|DUF293| RP:PFM:REP 110->232|PF01628|2e-04|35.8|123/224|HrcA| HM:PFM:NREP 2 HM:PFM:REP 109->283|PF01628|7.1e-11|36.0|175/224|HrcA| HM:PFM:REP 1->53|PF01726|2e-08|44.2|52/65|LexA_DNA_bind| GO:PFM:NREP 4 GO:PFM GO:0003677|"GO:DNA binding"|PF03444|IPR005104| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF03444|IPR005104| GO:PFM GO:0003677|"GO:DNA binding"|PF01628|IPR002571| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01628|IPR002571| RP:SCP:NREP 2 RP:SCP:REP 1->69|1hqcA1|4e-10|29.2|65/76|a.4.5.11| RP:SCP:REP 109->295|1stzA2|2e-12|22.8|180/236|d.110.2.3| HM:SCP:REP 1->84|1stzA1|3.9e-17|44.0|84/87|a.4.5.51|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 68->298|1stzA2|4.5e-20|33.2|214/236|d.110.2.3|1/1|GAF domain-like| OP:NHOMO 261 OP:NHOMOORG 260 OP:PATTERN -------------------------------------------------------------------- ---111------1111111-11111111111111111111111111111---111-----111111111111111111-1111-------------------------1----------------1111111111111111---111------11111-------1------1-----1-------1111-1---------1-1-----1111---1111-1111------11-111111-1111111-----1--------------------------------------------------------------111----1111111111111111111-111111--1111111111111111111---1-----------------------------------------------------------------------------------------1---------------------------------1111111-------1-----------------111111111-1----1----11-11-1-1-------11--11-----111-1-111-111111111--1-1--1-------------------------11-----------------------------------1---------------------------------------------------------------------------------------------1---------1------------------------------------------------------------------------11111111111111----111111---------------1---1--------1-------1--1111111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 234 STR:RPRED 78.0 SQ:SECSTR ccHHHHHHHHHHTTcTcHHcTTccHHHHHHHTTccHHHHHHHHHHHHHHTccccccccccTEcccccEEEEHHHHHHHTTTcccccHHHHTcccTTcccHHHHHHHHHHHTcE#EEEEcccGGGccccEEEEEEccccEEEEEEEETTEEEEE##EEEEcccccccHHHHHHTccGGGGccHHHHTTcHHHHHHHHHTcccccEEEcHHHHHHcHHTTcHHHHHHHcEEEEEcccGG############################################################### DISOP:02AL 1-2, 86-90, 299-300| PSIPRED ccHHHHHHHHHHHHHHHHccccccHHHHHHHccccHHHHHHHHHHHHHcccEEccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHEEEcccccccEEEEEEEEEEcccEEEEEEEcccEEEEEEEcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccEEEEEEEEcccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHcc //