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Thermus thermophilus HB27 (tthe0)
Gene : lysR.2
DDBJ      :lysR         transcriptional regulatory protein, lysR family (hydrogen peroxide-inducible genes activator)
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  594/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.94.1
:317 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   91->290 1i6aA PDBj 4e-29 35.7 %
:RPS:PDB   1->155 1c0wA PDBj 2e-22 11.9 %
:RPS:SCOP  1->104 1b9mA1  a.4.5.8 * 2e-14 10.6 %
:RPS:SCOP  91->290 1i69A  c.94.1.1 * 2e-33 34.0 %
:HMM:SCOP  1->112 1b9mA1 a.4.5.8 * 8.7e-26 44.8 %
:HMM:SCOP  85->294 1uthA_ c.94.1.1 * 2e-37 30.1 %
:RPS:PFM   5->52 PF00126 * HTH_1 2e-07 62.5 %
:RPS:PFM   90->292 PF03466 * LysR_substrate 1e-13 29.1 %
:HMM:PFM   90->293 PF03466 * LysR_substrate 2.5e-45 34.8 204/209  
:HMM:PFM   5->62 PF00126 * HTH_1 5.7e-25 62.1 58/60  
:BLT:SWISS 3->305 OXYR_ERWCH 3e-38 33.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS82213.1 GT:GENE lysR.2 GT:PRODUCT transcriptional regulatory protein, lysR family (hydrogen peroxide-inducible genes activator) GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(1773482..1774435) GB:FROM 1773482 GB:TO 1774435 GB:DIRECTION - GB:GENE lysR GB:PRODUCT transcriptional regulatory protein, lysR family (hydrogen peroxide-inducible genes activator) GB:PROTEIN_ID AAS82213.1 GB:DB_XREF GI:46197801 GB:GENE:GENE lysR LENGTH 317 SQ:AASEQ MKLTLDQLRYLVALAEEGSFTRAAERVYLTQPALSVQIRKLEEALRTRLFDRRKGTLTEAGRVAVAQARRVLEEVERLRLLVQGEAACFQGPFRLGVIPTLAPYLLPRLLPELKARFPRLSLSVREELTPGIVRGLEEGSLDAGLVGTEERHPGLRAEPLFTEAFWAYVAPGHPLFEREAVHPLEIPLEDTWVLAEGHCFRDQVLSVCRPSLGGRSVEFQSGDLETLVRLVDAAGGLTLLPEVALWTLSPAQRTRLRPLSPPGAGRTVYLLFREGSLKAPLLRALAEEVRRAFALLRSNARAQESAMMGAEVRHDQG GT:EXON 1|1-317:0| BL:SWS:NREP 1 BL:SWS:REP 3->305|OXYR_ERWCH|3e-38|33.1|299/305| SEG 59->85|eagrvavaqarrvleeverlrllvqge| BL:PDB:NREP 1 BL:PDB:REP 91->290|1i6aA|4e-29|35.7|196/212| RP:PDB:NREP 1 RP:PDB:REP 1->155|1c0wA|2e-22|11.9|151/173| RP:PFM:NREP 2 RP:PFM:REP 5->52|PF00126|2e-07|62.5|48/60|HTH_1| RP:PFM:REP 90->292|PF03466|1e-13|29.1|203/207|LysR_substrate| HM:PFM:NREP 2 HM:PFM:REP 90->293|PF03466|2.5e-45|34.8|204/209|LysR_substrate| HM:PFM:REP 5->62|PF00126|5.7e-25|62.1|58/60|HTH_1| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00126|IPR000847| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00126|IPR000847| RP:SCP:NREP 2 RP:SCP:REP 1->104|1b9mA1|2e-14|10.6|104/122|a.4.5.8| RP:SCP:REP 91->290|1i69A|2e-33|34.0|194/206|c.94.1.1| HM:SCP:REP 1->112|1b9mA1|8.7e-26|44.8|105/0|a.4.5.8|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 85->294|1uthA_|2e-37|30.1|209/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 2423 OP:NHOMOORG 600 OP:PATTERN -------------------------------------------------------------------- 33113112223211423----21125-----2255553A8-4251112----3441-3--22111266463--------1-14-1---222--111---11311221113--------------------------333-1---2-422522122221111111326324111111111111111-11---1143333345414444441344694441112-1-122122AB---------------1------1-------------1------------------------------------------------------1-211111111-1--1--1---2----2--2134222-113111-1--12115222-----229571125735555455454457-35333E58552-8663454BE445AA22153723341575555555533333143------------------------------256215JDAJHLLQNI8BBBBGGGBBBBB88LENBIGI-2B7864577J7C3H744462114311111111113532----1--12322--1-132311-322343--------------------------144653311625332222211343324232232--11136------65321536554643366-56556436445465556558B7341316364666664656544935133351-322222222222---2111114444-3339111111111111112333431513284BCCBAGDF7EDFB47AE21111111124343444445543343655554441111--3-11--------------------------------------------------12- -------------1------------------------------------------------------------------------------------------------------------------------------------------------4------1---------1------------3-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 313 STR:RPRED 98.7 SQ:SECSTR HHHHHHHHHHHHHHTccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEcTTccEEEcHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHTTTccHHHHHHHHHHHHHHcccccccTTccccccHHHHTcccEEcHHHHHcHHHHHHHEEEEEEEEcEEEEEcTTcTTTTTccccHHHHHTcEEEEEcTTcTTHHHHHHHHHHHTcccEEEEEEccHHHHHHHHHHTccEEEEEGGGccTTTTcTTcEEEEccTTcccEEEEEEEETTccccHHHHHHHHHHcTTccHHHHHHHHHcccHHHHccc#### DISOP:02AL 84-86, 294-317| PSIPRED ccccHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHcccEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHcccEEEEEEcccccccccEEEEEEcccEEEEEcccccccccccccHHHHccccEEEEcccccHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHccHHHHHHHHHHHHHcccccEEEEEccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //