[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermus thermophilus HB27 (tthe0)
Gene : paaD
DDBJ      :paaD         phenylacetic acid degradation protein paaD
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  135/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.52.8
:170 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->111 1uwdA PDBj 3e-04 32.1 %
:RPS:PDB   18->112 3cq1A PDBj 6e-17 25.8 %
:RPS:SCOP  20->108 2cu6A1  d.52.8.2 * 4e-14 26.1 %
:HMM:SCOP  18->112 1uwdA_ d.52.8.2 * 7.5e-19 44.7 %
:RPS:PFM   22->83 PF01883 * DUF59 2e-05 44.3 %
:HMM:PFM   23->93 PF01883 * DUF59 2.1e-21 50.0 70/76  
:HMM:PFM   155->168 PF09723 * CxxC_CxxC_SSSS 0.00044 42.9 14/42  
:BLT:SWISS 21->170 PAAD_ECOLI 9e-27 40.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80953.1 GT:GENE paaD GT:PRODUCT phenylacetic acid degradation protein paaD GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(588789..589301) GB:FROM 588789 GB:TO 589301 GB:DIRECTION - GB:GENE paaD GB:PRODUCT phenylacetic acid degradation protein paaD GB:PROTEIN_ID AAS80953.1 GB:DB_XREF GI:46196537 GB:GENE:GENE paaD LENGTH 170 SQ:AASEQ MVPPRGDAVRGPLGPGGESVVERYWEALKGVKDPEIPVLNIVEMGMVLGVEAEGKRVKVRFRPTFSGCPAIQLIREEIVGALKEAGAEEVEVEEARTPWSTEAMTEEAREKLLGYGVAPPLPLPMAGEDPPCPRCGSREVVLKNPFGATLCKTLYQCAACGEVFEAFKTV GT:EXON 1|1-170:0| BL:SWS:NREP 1 BL:SWS:REP 21->170|PAAD_ECOLI|9e-27|40.0|150/100| SEG 84->95|eagaeeveveea| BL:PDB:NREP 1 BL:PDB:REP 27->111|1uwdA|3e-04|32.1|84/102| RP:PDB:NREP 1 RP:PDB:REP 18->112|3cq1A|6e-17|25.8|93/98| RP:PFM:NREP 1 RP:PFM:REP 22->83|PF01883|2e-05|44.3|61/76|DUF59| HM:PFM:NREP 2 HM:PFM:REP 23->93|PF01883|2.1e-21|50.0|70/76|DUF59| HM:PFM:REP 155->168|PF09723|0.00044|42.9|14/42|CxxC_CxxC_SSSS| RP:SCP:NREP 1 RP:SCP:REP 20->108|2cu6A1|4e-14|26.1|88/91|d.52.8.2| HM:SCP:REP 18->112|1uwdA_|7.5e-19|44.7|94/0|d.52.8.2|1/1|Fe-S cluster assembly (FSCA) domain-like| OP:NHOMO 146 OP:NHOMOORG 138 OP:PATTERN ----------------1----------------------------------1---------------- -------1--1---1---------------------11111------1----111111-1111-1111111----------------------------1-----1-----------------------------------------------------------------------------11111---1------------------1--------12--1-------1-----------------------------------------------------------------------------------------------------------------------1---------------------1-------------1111--11111-----------------2------------1---11-1---111-----11--------1---------------------------------------1--111111111112111211111111111112221--11111---1---11-------------------211---------------------------------------------------------------------1------------------1--------------------1---1---11--111---1-1-----1--1111---------------------1--------------------------------------1---------------11111-----------11---1111----------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 95 STR:RPRED 55.9 SQ:SECSTR #################cHHHHHHHHHHTTcccTTTccccTTTTTcEEEEEEETTEEEEEEcccccccccccHHHHHHHHHHHTcTTccEEEEEEcccccGGGcccGGGTTT########################################################## DISOP:02AL 1-4, 8-11| PSIPRED cccccccccccccccccHHHHHHHHHHHHHccccccccccEEEccEEEEEEEEccEEEEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccHHHHHHHHHccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHcHHHHcccc //