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Thermus thermophilus HB27 (tthe0)
Gene : pilC
DDBJ      :pilC         pili assembly protein pilC
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  510/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:441 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   92->203 2vmbA PDBj 5e-11 31.2 %
:BLT:PDB   304->394 2vmbB PDBj 2e-10 33.0 %
:RPS:PDB   133->207 3c1qB PDBj 1e-13 28.4 %
:RPS:PDB   295->396 3c1qA PDBj 2e-12 28.4 %
:RPS:PFM   132->222 PF00482 * GSPII_F 1e-05 34.8 %
:RPS:PFM   309->429 PF00482 * GSPII_F 5e-11 32.2 %
:HMM:PFM   105->227 PF00482 * GSPII_F 1.4e-35 38.2 123/124  
:HMM:PFM   307->430 PF00482 * GSPII_F 2.2e-32 30.6 124/124  
:BLT:SWISS 39->434 TAPC_AERHY 5e-55 34.0 %
:PROS 199->227|PS00874|T2SP_F
:TM
:REPEAT 2|87->234|289->437
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80788.1 GT:GENE pilC GT:PRODUCT pili assembly protein pilC GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 427657..428982 GB:FROM 427657 GB:TO 428982 GB:DIRECTION + GB:GENE pilC GB:PRODUCT pili assembly protein pilC GB:PROTEIN_ID AAS80788.1 GB:DB_XREF GI:46196371 GB:GENE:GENE pilC LENGTH 441 SQ:AASEQ MRASTPQTVSVGKATKPPPLRVSAALARASWYTLSMPVYQYKARDRQGRLVEATIEAEDLRTAARLLRDRGLFVAEIKEPGKGLQAEVRIPALERGPGLKDLAIFSRQLATMLGAGLTLLQALAILERQTENRKFREILKQVRTDVEGGMAFSEALSKHKIFSRLYVNLVRAGETSGGLDLILDRLASFLEKELELRGKIRSAMTYPVIVFVFAVGVAYFLLTGIVPQFAQILTDLGSELPLLTRFLIAVSDLLRAATLPLLLLAVALFFAYRWYYGTPQGRRVIDRLKLRLPVFGNLNRKTAVARFSRTLALLLSSGVNIVEALDITKGTAGNSVVEEIVEAAKLKIQQGDPLNLTLAQHPFVFPPMVSSMVAIGEETGALDTMLSKVADFYEREVDEAVASLTAAIEPLMIIFLGVIVGMIVAGMFLPLFKIIGTLSVQ GT:EXON 1|1-441:0| BL:SWS:NREP 1 BL:SWS:REP 39->434|TAPC_AERHY|5e-55|34.0|388/413| PROS 199->227|PS00874|T2SP_F|PDOC00682| TM:NTM 3 TM:REGION 206->228| TM:REGION 247->269| TM:REGION 408->430| NREPEAT 1 REPEAT 2|87->234|289->437| SEG 59->72|dlrtaarllrdrgl| SEG 108->126|qlatmlgagltllqalail| SEG 253->268|llraatlpllllaval| BL:PDB:NREP 2 BL:PDB:REP 92->203|2vmbA|5e-11|31.2|112/121| BL:PDB:REP 304->394|2vmbB|2e-10|33.0|91/115| RP:PDB:NREP 2 RP:PDB:REP 133->207|3c1qB|1e-13|28.4|74/112| RP:PDB:REP 295->396|3c1qA|2e-12|28.4|99/111| RP:PFM:NREP 2 RP:PFM:REP 132->222|PF00482|1e-05|34.8|91/124|GSPII_F| RP:PFM:REP 309->429|PF00482|5e-11|32.2|121/124|GSPII_F| HM:PFM:NREP 2 HM:PFM:REP 105->227|PF00482|1.4e-35|38.2|123/124|GSPII_F| HM:PFM:REP 307->430|PF00482|2.2e-32|30.6|124/124|GSPII_F| OP:NHOMO 905 OP:NHOMOORG 512 OP:PATTERN -------------------------------------------------------------------- 122-------------------------------------1---1---1----2--------1-----------------2-122311-------------11---1-11111111111-11111----------------111--111111111111-111111111111-1--1-11--1-1112122111------1-----------11-----111--11-------11---------------11------------------------1------------------1--------------11--1---------11111111111-11112221111--1-1-1223223221221111111112231111-----111121---1--1--------------1-21---1--------1------1112-------------------11-1--1-----------------------------1-111-11--12222232222222222222213322222212225232232232321354442111111113224342333121--22111-33343335322222232-1111-1111--1-------1132211322344334323333333333333333343--12223------21231122222233313-2222223222232322332222221-1111111111111111122211111--312222222222--12111--22222231-11111111111111-2322212121233444423423134223211111111122333333333333333333332222222--1-111111------------------------------------11-1111111-31 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 220 STR:RPRED 49.9 SQ:SECSTR ###########################################################################################cccccccHHHHHHHHHHHHHHHHTTccHHHHHHHHHHTccccHHHHHHHHHHHHHHTTccHHHHHTTcTTTccHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHTHHHHH#######################################################################################ccccccHHHHHHHHHHHHHHHHTTccHHHHHHHHHHTcccHHHHHHHHHHHHHHHTTccHHHHHTTcTTTccHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHH########################################### DISOP:02AL 1-6, 8-32, 78-95| PSIPRED ccccccccccHHcccccccccccccccccccccccccEEEEEEEcccccEEEEEEEcccHHHHHHHHHHcccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //