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Thermus thermophilus HB27 (tthe0)
Gene : pilD
DDBJ      :pilD         type 4 prepilin peptidase pilD
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  413/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:354 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   8->93 PF06750 * DiS_P_DiS 1e-21 65.1 %
:HMM:PFM   101->210 PF01478 * Peptidase_A24 1.3e-19 46.9 98/106  
:HMM:PFM   221->317 PF01478 * Peptidase_A24 2.1e-19 58.8 85/106  
:HMM:PFM   8->89 PF06750 * DiS_P_DiS 1.5e-35 61.0 82/92  
:BLT:SWISS 10->125,282->352 LEP4_SYNY3 1e-27 60.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS82058.1 GT:GENE pilD GT:PRODUCT type 4 prepilin peptidase pilD GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1633329..1634393 GB:FROM 1633329 GB:TO 1634393 GB:DIRECTION + GB:GENE pilD GB:PRODUCT type 4 prepilin peptidase pilD GB:PROTEIN_ID AAS82058.1 GB:DB_XREF GI:46197645 GB:GENE:GENE pilD LENGTH 354 SQ:AASEQ MWPLFALLLGLAVGSFLNVVVHRLPRGESVAYPPSRCPQCGHRLGPWDLVPVLSYLALKGRCRYCARPISPRYPLVEALTGGLFLLASLFYPPGVEALLVFLFLAFLVALAFIDVDTFELPDPLTYGLLFLGLLASWALAFPLPFRESLDGSLMAAGGLALVAGYGNLFLRRFREARAEVPVGPHQVHMAALFGALLGPGVGMALAFLAWALSARTGRPVVLPDRLTLPLLPLAFLLAPALGLDFLESLKGSLLAAGGLALAGGLYWAFRPLPEEEEEPVAMGYGDVKLLGALGAWLGPYAFLALFLGVFAGALLGLLLRQRKLPFGPYLALGGVVAFFFGEALWGAYLRLLGV GT:EXON 1|1-354:0| BL:SWS:NREP 1 BL:SWS:REP 10->125,282->352|LEP4_SYNY3|1e-27|60.3|187/269| TM:NTM 10 TM:REGION 3->25| TM:REGION 70->92| TM:REGION 97->119| TM:REGION 124->146| TM:REGION 149->170| TM:REGION 190->212| TM:REGION 223->245| TM:REGION 251->273| TM:REGION 293->315| TM:REGION 328->350| SEG 97->112|allvflflaflvalaf| SEG 127->141|gllflgllaswalaf| SEG 149->168|ldgslmaagglalvagygnl| SEG 218->246|rpvvlpdrltlpllplafllapalgldfl| SEG 253->265|llaagglalaggl| SEG 301->319|aflalflgvfagallglll| RP:PFM:NREP 1 RP:PFM:REP 8->93|PF06750|1e-21|65.1|86/95|DiS_P_DiS| HM:PFM:NREP 3 HM:PFM:REP 101->210|PF01478|1.3e-19|46.9|98/106|Peptidase_A24| HM:PFM:REP 221->317|PF01478|2.1e-19|58.8|85/106|Peptidase_A24| HM:PFM:REP 8->89|PF06750|1.5e-35|61.0|82/92|DiS_P_DiS| OP:NHOMO 424 OP:NHOMOORG 416 OP:PATTERN -------------------------------------------------------------------- 111-------------------------------------1---1---1-------------1-----------------1-111111-----------------------------------------------------111--111111111111--11111111111-1--1-11--1-1111111111-1111111111111111-11111111111111-------11-------------------1-1--------1111---1--------------111------------------------21111-1111111111111111111111111111111--1111112111111111111--111111----------------------------------------------------------------------------------1--------------------------------1--1---1---1111111111111111111111111111--111-111111111-111-1111111111111111111111111--11111-11111111111111111-1111-----1---------1111111111111111111111111111111111111--11111------1-1----111-111111-1-11111111111111111---1111-----------------1---------1-------------11111-1111111111---------------11111111111111111112111111111-111111111111122222111--11--------------1-------------------------------------------11-1111111-11 --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 354-355| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHccccccEEccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccHHHHHHHHHHcc //