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Thermus thermophilus HB27 (tthe0)
Gene : pmbA
DDBJ      :pmbA         pmbA protein
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  482/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
d.283.1
:436 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   130->412 1vl4A PDBj 2e-42 37.2 %
:RPS:PDB   164->320 2ae5B PDBj 2e-11 14.7 %
:RPS:SCOP  2->434 1vl4A  d.283.1.1 * 5e-72 28.1 %
:HMM:SCOP  1->436 1vpbA_ d.283.1.1 * 5.9e-103 39.5 %
:RPS:PFM   46->305 PF01523 * PmbA_TldD 4e-32 40.6 %
:HMM:PFM   20->305 PF01523 * PmbA_TldD 8.5e-71 39.3 285/293  
:BLT:SWISS 43->411 Y856_METTH 2e-26 30.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80780.1 GT:GENE pmbA GT:PRODUCT pmbA protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(420140..421450) GB:FROM 420140 GB:TO 421450 GB:DIRECTION - GB:GENE pmbA GB:PRODUCT pmbA protein GB:PROTEIN_ID AAS80780.1 GB:DB_XREF GI:46196363 GB:GENE:GENE pmbA LENGTH 436 SQ:AASEQ MTLEEAKAYVLKRARELGVEAELLFEEERELSLRAREGRLEEIKEARQRGLGLRVVAEGKVGYAYTEELSPEALDWALEEARENALLSAKEGALPQGSPLGGHDLLGEGLSAPLERKKEAALALEAALRQDPRVKSVLMGGYLEREIRVALKSTQGAEGSFRTGFAALTGSFVMAQGKSVKQGWDFKAGKEFHALEPGRTALEFREKTARLLEAKPLKTGRYRAYLEPRAMAMLLSVFAEALSGKNALEGKSRLLGRLGERIASPLVTLVDDPTLEKGLLSRPFDAEGTPTARTVVVEKGVFKTFLHNLETAKALGQRNTGHAARSYRGTLGVAPTNLYLEPVGNLALTDGVVVTEFMGLHAGANPVTLDFSLQALGLWVEEGEVRHAVENFAVSGNLLELLQAVEAVGDDLDWLLWNAAYGSPTVAVAELSFAGA GT:EXON 1|1-436:0| BL:SWS:NREP 1 BL:SWS:REP 43->411|Y856_METTH|2e-26|30.4|359/454| SEG 16->42|elgveaellfeeerelslraregrlee| SEG 114->129|lerkkeaalaleaalr| BL:PDB:NREP 1 BL:PDB:REP 130->412|1vl4A|2e-42|37.2|274/428| RP:PDB:NREP 1 RP:PDB:REP 164->320|2ae5B|2e-11|14.7|150/522| RP:PFM:NREP 1 RP:PFM:REP 46->305|PF01523|4e-32|40.6|256/293|PmbA_TldD| HM:PFM:NREP 1 HM:PFM:REP 20->305|PF01523|8.5e-71|39.3|285/293|PmbA_TldD| RP:SCP:NREP 1 RP:SCP:REP 2->434|1vl4A|5e-72|28.1|420/428|d.283.1.1| HM:SCP:REP 1->436|1vpbA_|5.9e-103|39.5|418/0|d.283.1.1|1/1|Putative modulator of DNA gyrase, PmbA/TldD| OP:NHOMO 1099 OP:NHOMOORG 542 OP:PATTERN 113242331111111131111--2--------222222222222222222222244555551122--1 23321-------------------------------------------------------1----------------------22-22--1--1---------11------------------------------------222--13333333333111112332533211121111111111--2144--------------------1----------2-------------------------------------------------------------------------------------------------------222-------2-2-2---2222-------22--2222-322--2-3--32-233211111--2222222222222222222222---------222-222222222222--222222222222222222222222221221121122111---------------22212-2222222222222424222222222222222212222222222222222222222222222222222222222222--------------222-222--222222---------------------------224422--222222222222222222222222--2-22222-22222222222222222222-222222222222222222222234222222222222222222222222222--222222222222221222222111122-2-222222221213222----------2-22222323232222222----------222322222332333333333222222222-2222222----------21222---------------------2422222222--- --------------------------------------------------------------------------------------------------------------------------------------------------------------1------1-------1--------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 385 STR:RPRED 88.3 SQ:SECSTR ##########################################EEEEEEEEEEEEEEETTEEEEEEEccccHHHHHHHHHHHHHHHTTccccTTcccccGGccccTTGGGcc#HHHHHHHHHHHHHTTTTccTTEEEEEEEEEEEEEEEEEEEETTcEEEEEEEccTTEEEcccTTcTTTccEEEccHHHccGGHHHHHHHHHHHHHHHHHHHccTTccHHHHcEEEETTEEEEcccccGGGTccccEEEccccTTccccEEEEEcEEEEEEcccccEEEEEETTcccccTTccHHHHHTTccEEccccHHHHHHHcccccccEETT#####EEcccEEEEcccccccHHHEEEEEEEEcHHHHccTTTcEEEEEEEEEEEETTEEEEEEEEEEEEEEHHHHHHTEEEEcccc##ccTTccEEcccEEEEEEEEEE# DISOP:02AL 90-91| PSIPRED ccHHHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEccEEEEcEEEEEEEEEEEEEEccEEEEEEEccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEEccEEEEEEccccccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEccHHHHHHHHHHHHHccHHHHHccccHHHHccccEEcccEEEEEEccccccccccccccccccccccEEEEEccEEEEccccHHHHHHHcccccccccccccccccccccccEEccccccccccEEEEEEEEEEEEEcEEEEEEEEEEEEEEEEEccEEEEcccccEEEEcHHHHHHHHHHcccccEEEEcccEEEEcEEEEccEEEEcc //