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Thermus thermophilus HB27 (tthe0)
Gene : rbsC
DDBJ      :rbsC         ribose transport system permease protein rbsC
Swiss-Prot:             

Homologs  Archaea  25/68 : Bacteria  342/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:307 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   151->267 PF02653 * BPD_transp_2 1e-06 34.5 %
:HMM:PFM   12->287 PF02653 * BPD_transp_2 1.6e-48 31.6 263/267  
:BLT:SWISS 21->307 YUFQ_BACSU 1e-50 48.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81847.1 GT:GENE rbsC GT:PRODUCT ribose transport system permease protein rbsC GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1430819..1431742 GB:FROM 1430819 GB:TO 1431742 GB:DIRECTION + GB:GENE rbsC GB:PRODUCT ribose transport system permease protein rbsC GB:PROTEIN_ID AAS81847.1 GB:DB_XREF GI:46197434 GB:GENE:GENE rbsC LENGTH 307 SQ:AASEQ MSLDAAFLTALLLSTLRQTAPLLLTALGGMFSERSGVVNIALEGILLFGALTAAVVVERLEAALGPGPHPWLPWVGVLAAMGVGGLVAFVHALVSIKYRADQIISATAINLLALGAPSLVLTYFYGNATSSKEVENRLPLWGPEGFQLSPLVYAAFLLVPLTWWVLFKTPFGLRLRAVGEHPEAADTLGVNVHRMRYVGVVLSGVLTGLAGAYLSIGFLNQFVRGMSAGMGFIALAALIFGKWHPVGILFSTLLFGFASALAIQLQGSEILPAVLVQAFPYVVTVLVLAGFIGKSRPPAAVGKPYEK GT:EXON 1|1-307:0| BL:SWS:NREP 1 BL:SWS:REP 21->307|YUFQ_BACSU|1e-50|48.8|281/319| TM:NTM 9 TM:REGION 5->27| TM:REGION 38->60| TM:REGION 74->96| TM:REGION 104->126| TM:REGION 151->173| TM:REGION 196->218| TM:REGION 221->242| TM:REGION 246->268| TM:REGION 270->292| SEG 3->20|ldaafltalllstlrqta| SEG 50->64|altaavvverleaal| SEG 75->88|vgvlaamgvgglva| SEG 198->211|vgvvlsgvltglag| RP:PFM:NREP 1 RP:PFM:REP 151->267|PF02653|1e-06|34.5|116/271|BPD_transp_2| HM:PFM:NREP 1 HM:PFM:REP 12->287|PF02653|1.6e-48|31.6|263/267|BPD_transp_2| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF02653|IPR001851| GO:PFM GO:0006810|"GO:transport"|PF02653|IPR001851| GO:PFM GO:0016020|"GO:membrane"|PF02653|IPR001851| OP:NHOMO 515 OP:NHOMOORG 369 OP:PATTERN 221-11------------21111121111-1-----------------------1111111---2--- ----1---------------------------------1-----21111221111-11--1132111211--------1---1------------------------------------------1111122111222221---11-1-----12------------1111------------11-2222-111--1-111111111111---11111111211111111122--------------------11-1--1--1----------11111111111-111111111111111111111111111111111111111122211111111122---2222411111--1111-2-1122111112-12-------------112---1-1--11111111112-2121--3-24--4224533445661----3323333323---------22---12-----------------------------------1-----------------31--------21211--111411-1111131-2-----1------------1-2-2-1122--1111----------111113-1---------------------------112-------1-------2------2--1----------------------------------------------------------------------------------------------------------------2-2---------------------1----11111-11-----12233-----------------------------------------1------11111111111----1-11-1111111111111---1521114111--- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 126-139| PSIPRED cEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHEEEEccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccc //