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Thermus thermophilus HB27 (tthe0)
Gene : rtcB
DDBJ      :rtcB         rtcB protein
Swiss-Prot:             

Homologs  Archaea  65/68 : Bacteria  254/915 : Eukaryota  89/199 : Viruses  0/175   --->[See Alignment]
d.261.1
:476 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->476 2epgB PDBj 0.0 98.9 %
:RPS:SCOP  1->476 1uc2A  d.261.1.1 * e-152 47.7 %
:HMM:SCOP  1->476 1uc2A_ d.261.1.1 * 1.3e-161 54.2 %
:RPS:PFM   28->476 PF01139 * UPF0027 6e-90 52.4 %
:HMM:PFM   19->476 PF01139 * UPF0027 2.1e-151 55.5 418/420  
:BLT:SWISS 4->476 Y862_ARCFU e-130 54.3 %
:PROS 45->74|PS01288|UPF0027
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81768.1 GT:GENE rtcB GT:PRODUCT rtcB protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1348331..1349761 GB:FROM 1348331 GB:TO 1349761 GB:DIRECTION + GB:GENE rtcB GB:PRODUCT rtcB protein GB:PROTEIN_ID AAS81768.1 GB:DB_XREF GI:46197354 GB:GENE:GENE rtcB LENGTH 476 SQ:AASEQ MFFEKIAPYTYRIPRQGKMRVDAVFFASKEILKDLEAENYASLQQLMNVATLPGIVEPALAMPDIHWGYGFPIGGVAAFDPEEGGVVSPGGVGFDINCGVRLLASHLTLEDLLPRQKELADALYRLVPSGVGSERRDVRFSKRELKEILKEGAGWLVKRGYGYPEDVRFIESEGRLPWANPDKVSERAFERGAPQIGTLGSGNHFLEVQYVDEVYDEEAALAFGLFKGQVTVLIHTGSRGLGHQVCQDYVERFLKAAPRYGIELVDKQLAAAPIKSPEGQDYLQAMAAAANFAFANRQLIAHFVREAFEKVGFTPRDHGLRVLYDLAHNNAKLEEHGGRRVLVHRKGATRAFGPGHPEVPEAYRRVGQPVLVPGDMGRYSYVLAGTEKAMEVSFGSSCHGAGRKMSRHQAKKVARERNLVKELAERGILVRAATRATVDEEMPEAYKDVSLVVEAVEGAGIGKKVARLRPLIVVKG GT:EXON 1|1-476:0| BL:SWS:NREP 1 BL:SWS:REP 4->476|Y862_ARCFU|e-130|54.3|468/482| PROS 45->74|PS01288|UPF0027|PDOC00990| SEG 81->93|peeggvvspggvg| SEG 207->218|evqyvdevydee| SEG 285->296|amaaaanfafan| BL:PDB:NREP 1 BL:PDB:REP 2->476|2epgB|0.0|98.9|437/437| RP:PFM:NREP 1 RP:PFM:REP 28->476|PF01139|6e-90|52.4|389/396|UPF0027| HM:PFM:NREP 1 HM:PFM:REP 19->476|PF01139|2.1e-151|55.5|418/420|UPF0027| RP:SCP:NREP 1 RP:SCP:REP 1->476|1uc2A|e-152|47.7|472/480|d.261.1.1| HM:SCP:REP 1->476|1uc2A_|1.3e-161|54.2|472/480|d.261.1.1|1/1|Hypothetical protein PH1602| OP:NHOMO 509 OP:NHOMOORG 408 OP:PATTERN 111111111111111111111111-11--111111111111111111111111111111111111111 -1--1111111------11-1-----11111-----1111-1-11-1-1----11--1--12--1111111-----------11-1--111----------2---2--1----------------11-------1-111--1111111211111---------1---111-------------2-11111-------------------11--------------------21------------------------------------------------------------------------------------------1--1------------1-----------1---1----1-111--1111---12------------22--------------------------------------------------------------------------------------------------------------1----111111--------------13--111-----2-----31111---11---2---------11-111211-121-11111-111-1112111115511--------------------------------2-----------------------1---1111-------1-1---1112122222-1112222232122111112---131111-21212122211112-21-1111-------------------1-1111111-2-----------------11121----11-2223231-1-1------------------------------1111111-----------------------------------------------------11-11111111-- 12--111-2-1---1-------------------------------------------------------------------------------------------121211111211111111111114D1-112111111112111111111111111321211-1111111111119111121-----1-1----2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 475 STR:RPRED 99.8 SQ:SECSTR #ccEEEETTEEEEcccTTccccEEEEccHHHHHHHHHTTTHHHHHHHHHTTcTTccccEEEEEEEEccccccEEEEEEEcGGGTcEEcHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHTcTTTTTHHHHcEEEcccccHHHHHHHHHHHHTTTccHHHHHHHccccEEETEEETTEEEEEEcTTccGGTTccccTTcEEEEEEEEEEccHHHHHHHTccTTEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHTTcccccGGGccEETTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHccEEEEEEEcEEEEEEEETTEEEEEEEEccEEcccTTcTTccGGGTTTccEEEEcccTTccEEEEEccHHHHHHcccEEcccccccccHHHHHHHccHcccTTTTGGGTcEEEEccHHHHHHTcGGGcccccHHHHHHHHTTccEEEEEEEEEEEEEc PSIPRED cccEEccccEEEcccccccEEEEEEEccHHHHccccccHHHHHHHHHHHHccccccccEEEccccccccccccEEEEEEEcccccEEEcccEEcccccEEEEEEccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHccHHHHHHcccccHHHHHHHHccccccccccccccHHHHHccHHHccccccccEEEEEccHHHHHcHHHHHHcccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccHHHHHHcccEEEEEEccccccccccccccccHHHHHcccEEEEcccccccEEEEEEcccccHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHcccEEEEcccccHHHHcHHHcccHHHHHHHHHHccccEEEEEEEEEEEEcc //