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Thermus thermophilus HB27 (tthe0)
Gene : scU
DDBJ      :scU          IscU protein
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  653/915 : Eukaryota  123/199 : Viruses  0/175   --->[See Alignment]
d.224.1
:138 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->138 2qq4A PDBj 6e-76 99.3 %
:RPS:PDB   14->96 2e5aA PDBj 6e-19 7.2 %
:RPS:SCOP  4->136 1su0B  d.224.1.2 * 6e-05 44.7 %
:HMM:SCOP  1->139 1xjsA_ d.224.1.2 * 7.8e-51 54.3 %
:RPS:PFM   7->123 PF01592 * NifU_N 5e-21 47.0 %
:HMM:PFM   8->111 PF01592 * NifU_N 1.1e-27 36.5 104/127  
:BLT:SWISS 4->137 NIFU_BACSU 1e-34 50.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81716.1 GT:GENE scU GT:PRODUCT IscU protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1304658..1305074 GB:FROM 1304658 GB:TO 1305074 GB:DIRECTION + GB:GENE scU GB:PRODUCT IscU protein GB:PROTEIN_ID AAS81716.1 GB:DB_XREF GI:46197302 GB:GENE:GENE scU LENGTH 138 SQ:AASEQ MSVLDELYREILLDHYQSPRNFGVLPQATRQAGGMNPSCGDQVEVMVLLEGDTIADIRFQGQGCAISTASASLMTEAVKGKKVAEALELSRKFQAMVVEGAPPDPTLGDLLALQGVAKLPARVKCATLAWHALEEALR GT:EXON 1|1-138:0| BL:SWS:NREP 1 BL:SWS:REP 4->137|NIFU_BACSU|1e-34|50.8|132/147| BL:PDB:NREP 1 BL:PDB:REP 1->138|2qq4A|6e-76|99.3|138/138| RP:PDB:NREP 1 RP:PDB:REP 14->96|2e5aA|6e-19|7.2|83/329| RP:PFM:NREP 1 RP:PFM:REP 7->123|PF01592|5e-21|47.0|117/126|NifU_N| HM:PFM:NREP 1 HM:PFM:REP 8->111|PF01592|1.1e-27|36.5|104/127|NifU_N| GO:PFM:NREP 3 GO:PFM GO:0005506|"GO:iron ion binding"|PF01592|IPR002871| GO:PFM GO:0016226|"GO:iron-sulfur cluster assembly"|PF01592|IPR002871| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF01592|IPR002871| RP:SCP:NREP 1 RP:SCP:REP 4->136|1su0B|6e-05|44.7|132/136|d.224.1.2| HM:SCP:REP 1->139|1xjsA_|7.8e-51|54.3|138/0|d.224.1.2|1/1|SufE/NifU| OP:NHOMO 925 OP:NHOMOORG 800 OP:PATTERN -----------------------21111111111--------11212111332-----------1-1- 1221111111111121111-11111111111111111111111111111111111--1--11111111111111111111112111-1---------------------1------------------1-----1-22222---231--111-1111--------11111--------------1-11111111111111111111111122211111111111111111111111111111111111111111--11111-111111111111111111111111111111111111111111111111111111111111111112111111111111331111111111111-11221-111122111112-1----------11-11--1-11---------------1--1------------1---1-1--------------11111111122-111-11-11111----111111111111111111-----11111111111122221111222222122112111111211221222111121121111111111111122-111-1-1-11111-111112133222221--------------------------122112---1-1121111111111111112111--112-21-1111112111-1111111111-111111111111111111111121111111111111111111111111111--111111111111---11111111112----11111111111111111111111112-11111111111112111----------11111111111111--------------1111--1111--------11111211-----------1-1-1---1-11111111111- 111111--1--1111-11---11----111-------1-1111--111----1-11--11111111--11-1111-----1111111--12111111111--12221---223222111---1131121472-21611111114---11-1-13111-11-1-11111115---1-1-----------2-2---1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 138 STR:RPRED 100.0 SQ:SECSTR ccHHHHHHHHHHHHHHHcHHHHTTcccEEEEEEEEEEccEEEEEEEEEEETTEEEEEEEEccTTTccHHHHHHHHHHHTTccccccTTTccHHHHHHTTcccccGGGGGGGGGGGGGGcGGGHHHHHHHHHHHHHHHc DISOP:02AL 1-3| PSIPRED ccHHHHHHHHHHHHHHHcccccccccccccEEEccccccccEEEEEEEEEccEEEEEEEEEEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcc //