[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermus thermophilus HB27 (tthe0)
Gene : soxB
DDBJ      :soxB         sulfur oxidation protein soxB
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  101/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
d.114.1d.159.1
:573 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   29->573 2wdeA PDBj 0.0 100.0 %
:RPS:PDB   101->555 3c9fA PDBj 1e-29 9.4 %
:RPS:SCOP  102->361 2z1aA2  d.159.1.2 * 3e-22 23.2 %
:RPS:SCOP  373->563 2z1aA1  d.114.1.1 * 1e-22 23.0 %
:HMM:SCOP  32->373 1hp1A2 d.159.1.2 * 7.3e-61 32.9 %
:HMM:SCOP  374->565 1hp1A1 d.114.1.1 * 3.5e-24 26.6 %
:RPS:PFM   217->283 PF04027 * DUF371 8e-04 31.3 %
:HMM:PFM   389->516 PF02872 * 5_nucleotid_C 4.8e-17 27.8 115/151  
:HMM:PFM   237->300 PF00149 * Metallophos 2e-05 21.9 64/200  
:BLT:SWISS 112->299 5NTD_RAT 5e-11 26.4 %
:BLT:SWISS 349->427 TNR25_HUMAN 7e-04 34.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81394.1 GT:GENE soxB GT:PRODUCT sulfur oxidation protein soxB GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(1023717..1025438) GB:FROM 1023717 GB:TO 1025438 GB:DIRECTION - GB:GENE soxB GB:PRODUCT sulfur oxidation protein soxB GB:PROTEIN_ID AAS81394.1 GB:DB_XREF GI:46196979 GB:GENE:GENE soxB LENGTH 573 SQ:AASEQ MNRRELLQLLSALAVLGPRGWARALEDPRSLYDLPPYGDATLLYFSDLHGQAFPHYFMEPPNLIAPKPLMGRPGYLTGEAILRYYGVERGTPLAYLLSYVDFVELARTFGPIGGMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHMVSHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQLDAALAERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSAAGKALMRVDLKLWKGGIANLRVRVLPVLAEHLPKAEDVEAFLKAQLAPHQDHLFTPLAVSETLLYKRDTLYSTWDQLVGEAVKAIYPEVEVVFSPAVRWGTTILPGQAITWDHLYAYTGFTYPELYLFYLRGAQIKAVLEDIASNVFTSDPFYQQGGDVSRVFGLRYVLDPDAPTGERVREVEVGGRPLDPNRRYLAAAYGGRLQRVGEAKPGYEPRPIYEVLAEYLRSVGRVRVRPEPNVKVIGRNYRLPEVTG GT:EXON 1|1-573:0| BL:SWS:NREP 2 BL:SWS:REP 112->299|5NTD_RAT|5e-11|26.4|178/576| BL:SWS:REP 349->427|TNR25_HUMAN|7e-04|34.6|78/100| SEG 6->16|llqllsalavl| SEG 179->196|lgrerveellglfrgefl| SEG 494->505|gervrevevggr| BL:PDB:NREP 1 BL:PDB:REP 29->573|2wdeA|0.0|100.0|545/545| RP:PDB:NREP 1 RP:PDB:REP 101->555|3c9fA|1e-29|9.4|445/531| RP:PFM:NREP 1 RP:PFM:REP 217->283|PF04027|8e-04|31.3|67/132|DUF371| HM:PFM:NREP 2 HM:PFM:REP 389->516|PF02872|4.8e-17|27.8|115/151|5_nucleotid_C| HM:PFM:REP 237->300|PF00149|2e-05|21.9|64/200|Metallophos| RP:SCP:NREP 2 RP:SCP:REP 102->361|2z1aA2|3e-22|23.2|254/302|d.159.1.2| RP:SCP:REP 373->563|2z1aA1|1e-22|23.0|183/205|d.114.1.1| HM:SCP:REP 32->373|1hp1A2|7.3e-61|32.9|289/0|d.159.1.2|1/1|Metallo-dependent phosphatases| HM:SCP:REP 374->565|1hp1A1|3.5e-24|26.6|177/0|d.114.1.1|1/1|5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain| OP:NHOMO 119 OP:NHOMOORG 108 OP:PATTERN ------------------------------1---1---------1-1--------------------- --------------------------------------------------------------------------------1--11111---------------3---------------------111---1-1-------------------------------------------------11-1111--1-----------------2--------1-----------21-------------------------------------------------------------------------------------------1-------------1------------------------------------------------2221-11-111-------------11-1-1------------------1---211-1--1-1--------1-----------------------------------------------------------------------11111111111-----1---11-3-----------------1-1----2-----------1-----11-11-111-------------------1--11-----------11--------------11--1-----11--------------------------------------------------------------------------------------------------------1---------------------------------1----1111-------------11--1------------------------111-------------------------------------------111--1-111--- ----------------------------------------------------------------------------------------------------------------------------1---------------------------------1-----------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 545 STR:RPRED 95.1 SQ:SECSTR ############################cccccccccccEEEEEEcccTTccccccccccccccccGGGTTcTTcccHHHHHHHHTccTTcHHHHHHccTcTTcccccGGGcccHHHHHHHHHHHHHHHHHTTcEEEEEEccccccccHHHHccTTTTTHHHHTTccccEEcGcccHHHHHHHHHHHHHHTTTTcccccEEEEcTTccEEEcEEEcTTTccEEEEEEcccccccccTTEEEccHHHHTTcHHTTcHHHHHHTTccccEEEEEccccccTTTcHHHHHHcEEEEEEcccccEEEcEEEETTEEEEEEccTTcEEEEEEEccccGGGcccHHHHEEEEEEEccHHHHHHHHHHHHHHHHHHHTTTTEEEEccccccccccTTcHHTTGGGccccGTTccEEEEEEGGGcccccccEEEEEHHHHHHHccccccEEEEEEEEHHHHHHHHHHHHccccccccccGGGGcccTTcccccccccEcEccccccccEEEEEEcccccccEEEEEEEGGGHHHHHHHHHHTcccccccEEEEcccHHHHHHHcccEEETTcccccccccc PSIPRED ccHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEccccccccEEEcccccccccHHHcccccccccHHHHHHcccccccccEEEEEccccHHHHccccccccHHHHHHHHHHHHHHHHHHcccEEEEEccccccccEEEEEEccHHHHHHHHHccccEEEccccccccHHHHHHHHHHccccEEEEEEEEccccccccccEEEEEEccEEEEEEEEEcHHHcccccccccccEEEccHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHcccccEEEEcccccEEEccEEEccEEEEEEcccccEEEEEEEEEEcccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHccEEEEEEccccccccccccHHHHHHHHHHHHHccEEEEEcccccccccccccccccHHHHHHHcccccccEEEEEEcHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEEEcccccccEEEEEEEccEEcccccEEEEEEEccccccccccccccccccHHHHHHHHHHHcccEEEEccccEEEEEcccccccccc //