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Thermus thermophilus HB27 (tthe0)
Gene : soxZ
DDBJ      :soxZ         soxZ
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  37/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.1.18
:108 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->107 1v8hA PDBj 9e-59 100.0 %
:RPS:SCOP  2->107 1v8hA1  b.1.18.19 * 1e-15 100.0 %
:HMM:SCOP  2->107 1v8hA1 b.1.18.19 * 2.9e-26 37.7 %
:RPS:PFM   15->105 PF08770 * SoxZ 7e-17 46.2 %
:HMM:PFM   8->104 PF08770 * SoxZ 9.6e-33 44.3 97/100  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81397.1 GT:GENE soxZ GT:PRODUCT soxZ GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(1026857..1027183) GB:FROM 1026857 GB:TO 1027183 GB:DIRECTION - GB:GENE soxZ GB:PRODUCT soxZ GB:PROTEIN_ID AAS81397.1 GB:DB_XREF GI:46196982 GB:GENE:GENE soxZ LENGTH 108 SQ:AASEQ MPFRTIARLNPAKPKAGEEFRLQVVAQHPNEPGTRRDAEGKLIPAKYINLVEVYFEGEKVAEARPGPSTSANPLYAFKFKAEKAGTFTIKLKDTDGDTGEASVKLELA GT:EXON 1|1-108:0| BL:PDB:NREP 1 BL:PDB:REP 2->107|1v8hA|9e-59|100.0|106/106| RP:PFM:NREP 1 RP:PFM:REP 15->105|PF08770|7e-17|46.2|91/97|SoxZ| HM:PFM:NREP 1 HM:PFM:REP 8->104|PF08770|9.6e-33|44.3|97/100|SoxZ| RP:SCP:NREP 1 RP:SCP:REP 2->107|1v8hA1|1e-15|100.0|106/106|b.1.18.19| HM:SCP:REP 2->107|1v8hA1|2.9e-26|37.7|106/0|b.1.18.19|1/1|E set domains| OP:NHOMO 38 OP:NHOMOORG 37 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------11111----------------------------------------------11--------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111---1-111-------------1--1-1------------------1---1-1-1--1-1-------------------------------------------------------------------------------------111-11-----1----------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------1---------------------------------------------------------1----------------------------112-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 106 STR:RPRED 98.1 SQ:SECSTR #cccEEEEEEcccccTTcEEEEEEEEcccccccccccTTccccccccEEEEEEEETTEEEEEEccccccccccEEEEEEEccccEEEEEEEEETTccEEEEEEEEcc# DISOP:02AL 1-2| PSIPRED ccEEEEEEEcccccccccEEEEEEEEEcccccccEEcccccccccccEEEEEEEEccEEEEEEEccccccccccEEEEEEEcccccEEEEEEEcccccEEEEEEEEEc //