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Thermus thermophilus HB27 (tthe0)
Gene : wbpB
DDBJ      :wbpB         lipopolysaccaride biosynthesis protein wbpB
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  80/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.2.1d.81.1
:310 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   69->193 3e18B PDBj 1e-07 24.8 %
:RPS:PDB   3->303 3dtyD PDBj 2e-22 23.3 %
:RPS:SCOP  10->185 1gcuA1  c.2.1.3 * 8e-14 21.4 %
:RPS:SCOP  167->206 1evjA2  d.81.1.5 * 9e-04 30.8 %
:HMM:SCOP  3->141 1ofgA1 c.2.1.3 * 6.4e-24 36.2 %
:HMM:SCOP  133->206 2nvwA2 d.81.1.5 * 1.8e-06 28.8 %
:RPS:PFM   10->121 PF01408 * GFO_IDH_MocA 1e-04 35.3 %
:HMM:PFM   3->125 PF01408 * GFO_IDH_MocA 1.8e-17 36.3 113/120  
:HMM:PFM   153->226 PF02894 * GFO_IDH_MocA_C 1.7e-13 35.6 73/115  
:BLT:SWISS 72->196 YTET_BACSU 4e-09 28.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80635.1 GT:GENE wbpB GT:PRODUCT lipopolysaccaride biosynthesis protein wbpB GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(277143..278075) GB:FROM 277143 GB:TO 278075 GB:DIRECTION - GB:GENE wbpB GB:PRODUCT lipopolysaccaride biosynthesis protein wbpB GB:PROTEIN_ID AAS80635.1 GB:DB_XREF GI:46196217 GB:GENE:GENE wbpB LENGTH 310 SQ:AASEQ MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEGFTDLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFLG GT:EXON 1|1-310:0| BL:SWS:NREP 1 BL:SWS:REP 72->196|YTET_BACSU|4e-09|28.8|125/428| SEG 44->59|ffpeaefftepeafea| BL:PDB:NREP 1 BL:PDB:REP 69->193|3e18B|1e-07|24.8|125/337| RP:PDB:NREP 1 RP:PDB:REP 3->303|3dtyD|2e-22|23.3|288/349| RP:PFM:NREP 1 RP:PFM:REP 10->121|PF01408|1e-04|35.3|102/119|GFO_IDH_MocA| HM:PFM:NREP 2 HM:PFM:REP 3->125|PF01408|1.8e-17|36.3|113/120|GFO_IDH_MocA| HM:PFM:REP 153->226|PF02894|1.7e-13|35.6|73/115|GFO_IDH_MocA_C| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01408|IPR000683| RP:SCP:NREP 2 RP:SCP:REP 10->185|1gcuA1|8e-14|21.4|154/174|c.2.1.3| RP:SCP:REP 167->206|1evjA2|9e-04|30.8|39/150|d.81.1.5| HM:SCP:REP 3->141|1ofgA1|6.4e-24|36.2|130/220|c.2.1.3|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 133->206|2nvwA2|1.8e-06|28.8|73/0|d.81.1.5|1/1|Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain| OP:NHOMO 90 OP:NHOMOORG 88 OP:PATTERN --------1111111-1--------------------------------------------------- ----1-------------------------------------1--12-----121-------------------------------1------111-------------1---------------11--------1------------1--------------------------11---------1----------------------1-11------11-----------1-------------------------------------------------------------------------------------------------------------------------------1---------------1-----------------------------------------11--111-11111111--------------------------------------------------------------1-------------------------------1--1--------11--1--1--------------------------1--------------1-------------11---------11111111111--1-------1-----1----------------1------------------------------------------------------------------------------------------------------------------1---1-1------------1----11--1-------1------------------------------------------------1------------------------------------------------11111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 303 STR:RPRED 97.7 SQ:SECSTR ccEEEEEccccHHHHHHHHHHGGGcEEEEEEEcccHHHHHHHHHHTTccGGGccccHHHHHHHTTcTHTcccEEEEEccGGGHHHHHHHHHHTTcEEEEcccccccHHHHHHHHHHHHHTTccEEEccGGGGcHHHHHHHHHHTTTHHHHHHHHHHcTccEEEEEEEccTTccccccHHHHTTHHHHHHHHHcTTccEEEcEEEEEcccEEEEEEETTccEEEEEcccTTcccEEEEEEEccTEEEEEETTcccEEEETTTTccHHTTccccTTccccHHHHHHHHHHHTTcccTTcccccHH####### DISOP:02AL 304-305| PSIPRED cEEEEEEEccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHccHHHHHHHccccccccHHHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHcccccEEEEEEEEEcccccccccccccccccccEEEHHHHHHHHHHHHHccccEEEEEEEEEccccccEEEcccEEEEEEEEccccccHHHHHcccccEEEEEEEEEEEEEEccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccc //