REPEAT (org=bpvp2&id=AAR97635.1)

>AAR97635.1 bpvp2 AAR97635.1 AY505112 "outer capsid protein"
#RepAlignM (coded by Takeshi Kawabata) LastModDate:January 19, 2002
#LENGTH        460
#NPREPATH      5
#NNOVPATH      6
#NMULPATH      1
[MULTIPLE_REPEAT 1]
#NSEGMENT      5
#SEGMENT  1   141 ->   186 type S Sc   65 SqID  40.5 Zsc   2.4
#SEGMENT  2   237 ->   281 type S Sc   67 SqID  36.6 Zsc   2.6
#SEGMENT  3   286 ->   329 type S Sc  133 SqID  55.8 Zsc  10.3
#SEGMENT  4   331 ->   373 type M Sc  284 SqID 100.0 Zsc  28.0
#SEGMENT  5   375 ->   428 type S Sc   93 SqID  44.2 Zsc   5.6
#ALIGNMENT
1     141:NVSGLVGL---NA--IG-SDG-SLVVG-------AMGMEGMRSTDKGLTWSYIG--NGFG:  184
2     237:TAS----A---INKILHVGGN-KLIAL-------LGSGYAAVSNDLGATWSALPRWLNSG:  281
3     286:NTS----F---FD--GAVTATGAIIAV-------GQNGFASISRNGGVTWSALP--RYLG:  327
4     331:NTS----I---VA--IGVSDT-AIVVG-------GNNGNCAISRNDGVTWSALP--LNFG:  371
5     375:GSG----IRDRSI--AGASNG-TFLVGLSGSPISGNNGYLALSYDDGVTWQQPP--RYLG:  425
         :. +             ...      ..       . .+  . * . *.**+..+     *

1     185:TG:  186
2       -:--:   -
3     328:MP:  329
4     372:VP:  373
5     426:IP:  427
         : .


[MULTIPLE_REPEATS_SYMBOLIC_OUTPUT]
       :       +      :       +       :      +       :      +       : |460 aa
                    1111111        2222222 333333444444455555555      |#1|5 seg
//